
Review Article Volume 3 Issue 2
Some observations about quantum chemistry software GAUSSIAN
Mohit K Sharma
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Amity Centre for Astronomy & Astrophysics, Amity Institute of Applied Sciences, Amity University, India
Correspondence: Mohit K Sharma, Amity Centre for Astronomy & Astrophysics, Amity Institute of Applied Sciences, Amity University, Noida 201313, India
Received: December 21, 2018 | Published: April 3, 2019
Citation: Sharma MK. Some observations about quantum chemistry software GAUSSIAN. Open Access J Sci. 2019;3(2):75-79. DOI: 10.15406/oajs.2019.03.00134
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Abstract
When laboratory study of some molecule is not available, one may plan to use data obtained from Quantum Chemistry software, such as GAUSSIAN, MOLPRO, NWCHEM, etc. For our investigation of cosmic molecules, we need reliable data for rotational and centrifugal distortion constants. For some molecules, we have obtained these data with the help of Quantum Chemistry software GAUSSIAN and compared them with those obtained from the laboratory studies. We have found that in some cases, the two sets of data are very close to each other whereas in some cases, they differ very much. As the laboratory measurements provide the most reliable data, one would like to use the GAUSSIAN data only when the laboratory data are available. Thus, an obvious question arises how to decide the reliability of GAUSSIAN data, when for that particular molecule no laboratory data are available. Further, when the laboratory data are available, no one would like to use the GAUSSIAN data.
Introduction
In a cosmic object having molecules, kinetic temperature in general is very low; few tens of Kelvin. Thus, one is concerned with the rotational levels in the ground vibrational state and ground electronic state. The rotational and centrifugal distortion constants, electric dipole moment can be used for calculation of energies of rotational levels and radiative transition probabilities (Einstein A-coefficients) for radiative transitions between the levels. We have investigated some molecules where laboratory data are available and for the same molecules we have obtained the data with the help of GAUSSIAN also. We have found that for some molecules, the two sets of data are in good agreement whereas for some molecules, they differ very much. As the laboratory data are the most reliable, one would like to use the GAUSSIAN data only in absence of the laboratory data. Thus, an obvious question arises how to decide the reliability of GAUSSIAN data. We are aware of the fact that the frequencies of spectral lines obtained from the GAUSSIAN data are not as accurate as required by the astronomers. However, the GAUSSIAN data can play important role in getting qualitative results about a molecule. We could not succeed in running the CCSD and CCSD (T) methods for the GAUSSIAN, as the computer program broke down each time during the execution. Therefore, we have employed the functional B3LYP method, i.e., Becke’s three parameter exchange function B3 (Becke1) with Lee, Yang and Parr’s gradient corrected exchange-correlation functional.2
Investigation
In the present discussion, we have considered the following molecules following sections.-to be deleted.
Cyclopropenone
Guillemin et al.,3 have recorded spectrum of cyclopropenone (c-C3H2O) and have derived rotational and centrifugal distortion constants for Watson’s rotational operator written in Ir representation and - to be deleted with A-type reduction, given in Table 1 (column 2). Sharma et al.4 have optimized the cyclopropenone with the help of GAUSSIAN 2009 Frisch et al.5 using B3LYP method and cc-pVDZ basis set. The values are given in Table 1 (column 3). The two sets of data are in good agreement. The deviations of rotational constants A, B and C, with respect to their experimental values are 0.46%, 1.18% and 0.90%, respectively.
Constant |
Laboratory |
cc-pVDZ |
A |
32040.73 |
31894.85 |
B |
7825.046 |
7733.81 |
C |
6280.685 |
6224.503 |
|
1.79362×10−3 |
1.651250766×10−3 |
|
33.7882×10−3 |
3.271020188×10−2 |
|
50.65×10−3 |
4.379488485×10−2 |
|
0.38536×10−3 |
3.533088298×10−4 |
|
22.156×10−3 |
2.093510188×10−2 |
HJ |
|
2.937852086×10−10 |
HJK |
|
6.851055671×10−8 |
HKJ |
|
−1.128055614×10−7 |
HK |
|
9.251718141×10−8 |
hJ |
|
2.362038947×10−10 |
hJK |
|
3.968188988×10−8 |
hK |
|
1.205246347×10−6 |
Table 1 Rotational and centrifugal distortion constants in MHz of c-C3H2O
Titanium dihydride
Inspired with good agreement between two sets of data for c-C3H2O, Sharma et al.,6 decided to go for the investigation of titanium dihydride (TiH2) for which laboratory data are not available. They6 have optimized the molecule TiH2 with the help of GAUSSIAN 2009 Frisch et al.,5 where B3LYP method and cc-pVTZ basis set are used. The rotational and centrifugal distortion constants obtained for Watson’s rotational operator written in Ir representation and - to be deleted with A-type reduction are given in Table 2. The outcome of the investigation is very exciting.
Constant |
cc-pVTZ |
Constant |
cc-pVTZ |
A |
2.8589602 × 105 |
|
2.037108491 × 10−3 |
B |
1.2520818 × 105 |
|
−1.928681064 × 10−2 |
C |
8.707408 × 104 |
|
−1.946479675 × 10−2 |
|
6.004343 |
|
5.110638046 × 10−1 |
|
−4.186548023 × 101 |
|
1.014000418 × 10−3 |
|
2.549058853 × 102 |
|
−3.557138924 × 10−3 |
|
2.465123 |
|
1.085768474 × 10−1 |
|
2.332384 |
|
|
Table 2 Rotational and centrifugal distortion constants in MHz of TiH2
Ethylene oxide
Pan et al.7 recorded spectrum of ethylene oxide (c-C2H4O) and have derived rotational and centrifugal distortion constants for Watson’s rotational operator written in Ir representation and – to be deleted with A-type reduction, given in Table 3 (column 2). Sharma et al.8 have optimized the ethylene oxide with the help of GAUSSIAN 2009 Frisch et al.5 bf using B3LYP method and cc-pVDZ basis set. The values of data are given in Table 3 (column 3). The two sets of data are in good agreement. The deviations of rotational constants A, B and C, with respect to their experimental values are -0.79%, -0.58% and -0.70%, respectively. It again provided us a confidence about our investigation of TiH2 Sharma et al.6
Constant |
Laboratory |
cc-pVDZ |
A |
25483.89 |
25685.72 |
B |
22120.85 |
22249.95 |
C |
14097.84 |
14197.62 |
|
51.1883 × 10−3 |
50.79096319 × 10−3 |
|
−70.4938 × 10−3 |
−71.09013012 × 10−3 |
|
27.6541 × 10−3 |
28.41532834 × 10−3 |
|
−9.01689 × 10−3 |
8.836730565 × 10−3 |
|
3.3491 × 10−3 |
−6.556467036 × 10−3 |
|
0.2456 × 10−6 |
−5.960452772 × 10−8 |
|
−5.2164 × 10−6 |
−4.838170644 × 10−6 |
|
15.7370 × 10−6 |
15.30527314 × 10−6 |
|
−10.638 × 10−6 |
−10.40655085 × 10−6 |
|
−0.05097 × 10−6 |
−2.887999339 × 10−8 |
|
1.4297 × 10−6 |
−1.411514955 × 10−6 |
|
−17.8633 × 10−6 |
1.713117251 × 10−5 |
LJ |
−0.1210 × 10−9 |
LJJK |
−0.1288 × 10−9 |
LJK |
0.624 × 10−9 |
LKKJ |
−0.800 × 10−9 |
LK |
0.892 × 10−9 |
lJ |
−0.00367 × 10−9 |
lJK |
0.0921 × 10−9 |
lKJ |
−0.448 × 10−9 |
lK |
0.679 × 10−9 |
PK |
−1.114 × 10−12 |
Table 3 Rotational and centrifugal distortion constants (MHz) of c-C2H4O
Vinylidene
Inspired with good agreement between two sets of data for c-C3H2O and for c-C2H4O, we decided to go for the investigation of vinylidene (H2CC) for which also laboratory data are not available. bf Sharma et al.9 have optimized the molecule H2CC with the help of GAUSSIAN 2009 Frisch et al.5 employing the B3LYP method in conjunction with four basis sets, cc-pVTZ, aug-cc-pVDZ, aug-cc- pVTZ and aug-cc-pVQZ. The resulting rotational and centrifugal distortion constants for Watson’s rotational operator written in Ir representation and - to be deleted with S-type reduction are given in Table 4. There is good agreement between the data obtained from different basis sets.
Constant |
cc-pVTZ |
aug-cc-pVDZ |
aug-cc-pVTZ |
aug-cc-pVQZ |
A ×10−5 |
2.858903 |
2.858903 |
2.858903 |
2.858903 |
B ×10−4 |
3.993411 |
3.993411 |
3.993411 |
3.993411 |
C ×10−4 |
3.503965 |
3.503965 |
3.503965 |
3.503965 |
DJ ×103 |
42.70791 |
43.44087 |
44.28356 |
44.55227 |
DJK |
20.98798 |
18.94745 |
20.44459 |
20.4197 |
DK |
5.317725 |
6.440168 |
5.879314 |
5.933398 |
d1 ×102 |
−1.442126677 |
−1.373607832 |
−1.445080323 |
−1.452037644 |
d2 ×102 |
−2.675152631 |
−2.408896481 |
−2.609261594 |
−2.613141728 |
HJ ×106 |
−9.085110924 |
−7.573403608 |
−8.601743486 |
−8.655849617 |
HJK ×103 |
2.717971 |
2.280665 |
2.564823 |
2.580959 |
HKJ ×102 |
−1.854934803 |
−1.597951879 |
−1.709596957 |
−1.731162015 |
HK ×102 |
2.401038 |
2.151629 |
2.272677 |
2.29427 |
h1 ×106 |
−1.524539329 |
−1.248551723 |
−1.444404960 |
−1.443374339 |
h2 ×106 |
4.698862 |
3.929762 |
4.456302 |
4.485417 |
h3 ×106 |
1.651997 |
1.367133 |
1.5717 |
1.57211 |
Table 4 Rotational and centrifugal distortion constants in MHz of H2CC
Silanone
Bailleux et al.10 have recorded spectrum of silanone (H2SiO) and derived rotational and centrifugal distortion constants for Watson’s rotational operator written in Ir representation and - to be deleted with A-type reduction, given in Table 5 (column 2). Sharma et al.11 have optimized the molecule H2SiO with the help of GAUSSIAN 2009 Frisch et al.5 bf employing B3LYP method in conjunction with three basis sets, aug-cc-pVDZ, aug-cc-pVTZ and aug-cc-pVQZ. The values are given in Table 5 (columns 3-5). There is very good agreement between the four sets of data. The deviations of rotational constants A, B and C obtained for the basis set aug-cc-pVQZ, with respect to their experimental values are 0.24%, 0.53% and 0.18%, respectively.
Constant |
Experiment |
cc-pVDZ |
aug-cc-pVDZ |
aug-cc-pVTZ |
aug-cc-pVQZ |
A ×105 |
1.666573 |
1.62688 |
1.62316 |
1.658067 |
1.662584 |
B ×10−4 |
1.867939 |
1.787253 |
1.78186 |
1.842979 |
1.858002 |
C ×10−4 |
1.674277 |
1.610344 |
1.605601 |
1.65862 |
1.671235 |
|
1.75216 |
1.631609 |
1.647716 |
1.66202 |
1.676962 |
|
6.02486 |
5.543688 |
5.632878 |
5.839659 |
5.871728 |
|
7.5 |
8.199677 |
8.090008 |
8.443277 |
8374.246 |
|
2.0811 |
1.822749 |
1.836778 |
1.876133 |
1.906645 |
|
4.13 |
3.503961 |
3.550486 |
3.660305 |
3.689542 |
|
|
6.733706 |
6.296932 |
5.253595 |
5.657116 |
|
4.757 |
7.800663 |
7.879044 |
8.266248 |
8.41835 |
|
-4.774 |
-1.57875 |
-1.796 |
-2.14959 |
-2.2458 |
|
|
1.443688 |
1.377452 |
1.435596 |
1.415752 |
|
|
3.572809 |
3.531365 |
3.408102 |
3.524366 |
|
|
4.031514 |
4.065714 |
4.256998 |
4.334719 |
|
|
4.511626 |
4.605502 |
4.727325 |
4.732419 |
Table 5 Rotational and centrifugal distortion constants in MHz of H2SiO
cis-Formic acid
Winnerwisser et al.12 have recorded spectrum of cis-Formic acid (cis-HCOOH) and derived rotational and centrifugal distortion constants for Watson’s rotational operator written in Ir representation and - to be deleted with A-type reduction, given in Table 6 (column 2). Sharma et al.13 have optimized the molecule cis-HCOOH with the help of GAUSSIAN 2009 Frisch et al.5 bf employing B3LYP method in conjunction with three basis sets, aug-cc-pVDZ, aug-cc-pVTZ and aug-cc-pVQZ. The values are given in Table 6 (columns 3-5). There is very good agreement between the four sets of data. The deviations of rotational constants A, B and C obtained for the basis set aug-cc-pVQZ, with respect to their experimental values are -1.16%, -0.22% and -0.46%, respectively. All these data provided us a encouragement about our investigations of TiH2 and H2CC molecules.
Constant |
Lab |
|
Optimization |
|
|
aug-cc-pVDZ |
aug-cc-pVTZ |
aug-cc-pVQZ |
A |
86461.62 |
85967.44 |
87387.25 |
87478.32 |
B |
11689.18 |
11617.78 |
11690.94 |
11715.35 |
C |
10284 |
10234.65 |
10311.44 |
10331.7 |
|
8.35515 |
6.594446 |
6.564108 |
6.564716 |
|
−71.4412 |
259.8124 |
274.8887 |
275.2381 |
|
2361.672 |
2176.623 |
2296.741 |
2303.991 |
|
1.41773 |
0.592251 |
0.556347 |
0.55381 |
|
40.747 |
115.2922 |
118.6733 |
118.4331 |
|
1.064 |
−0.4527703926 |
−0.4722888293 |
−0.4808865771 |
|
−0.2974 |
9.566051 |
10.98867 |
11.10552 |
|
−9.673 |
108.8903 |
119.0774 |
119.4857 |
|
185.11 |
1.389687 |
1.452612 |
1.434686 |
|
2.317 |
0.108608 |
0.08907 |
0.084311 |
|
−0.73 |
0.746964 |
0.783595 |
0.775275 |
|
|
37.1677 |
39.04597 |
38.76245 |
LK × 109 |
−20.2 |
|
|
|
lJK × 109 |
0.558 |
|
|
|
Table 6 Rotational and centrifugal distortion constants (MHz) of cis-HCOOH
Disilicon
McCarthy et al.14 has recorded spectrum of disilicon (Si2C) and have derived rotational and centrifugal distortion constants for Watson’s rotational operator written in Ir representation and - to be deleted with S-type reduction, given in Table 7 (column 2). Sharma et al.15 have optimized the molecule Si2C with the help of GAUSSIAN 2009 Frisch et al.5 employing the B3LYP method in conjunction with three basis sets, aug-cc-pVDZ, aug-cc-pVTZ and aug-cc-pVQZ. The values are given in Table 7 (columns 3-5). There is large disagreement between the laboratory data and those obtained from GAUSSIAN. The deviations of rotational constants A, B and C obtained for the basis set aug-cc-pVQZ, with respect to their experimental values are -51.89%, 20.23% and 15.28%, respectively. These large deviations perturbed us and lead to a question about the reliability of GAUSSIAN data.
Constant |
Experimental |
aug-cc-pVDZ |
aug-cc-pVTZ |
aug-cc-pVQZ |
A |
64074.34 |
115272.4 |
141935.4 |
133191.5 |
B |
4395.621 |
3648.742 |
3597.055 |
3655.86 |
C |
4102.028 |
3536.791 |
3508.148 |
3558.194 |
DJ ×103 |
9.7315 |
18.02061 |
28.55172 |
17.97574 |
DJK |
−0.8572075 |
−7.016988202 |
−17.432464312 |
−9.250582631 |
DK×10−2 |
0.235881 |
7.258966 |
27.69195 |
12.60339 |
d1 ×103 |
1.519832 |
2.2482 |
3.425177 |
2.169344 |
d2 ×101 |
0.51591 |
1.269923 |
2.405429 |
1.420247 |
HJ ×107 |
−0.41349 |
−6.979665512 |
−26.90729235 |
−4.538089470 |
HJK ×104 |
0.93298 |
9.032487 |
48.46837 |
10.80401 |
HKJ ×101 |
−0.0188755 |
−2.856368246 |
−22.85802143 |
−4.878977881 |
HK |
0.044863 |
26.42362 |
320.7195 |
61.69333 |
hj ×108 |
−0.5231 |
−11.16426814 |
−43.12215486 |
−6.341531159 |
hk ×102 |
|
1.388191 |
7.346143 |
3.083056 |
hjk ×105 |
−0.6586 |
−2.147381766 |
−9.373151002 |
−1.964934254 |
Table 7 Rotational and centrifugal distortion constants of Si2C in MHz
Discussion
When got good agreement between the laboratory data and those obtained with the help of GAUS- SION for c-C3H2O, c-C2H4O, H2SiO and cis-HCOOH, we felt encouraged that in absence of lab- oratory data for a particular molecule, at least qualitative analysis of the molecule could be done with the help of the GAUSSIAN data. But, a large disagreement between the two sets of data for Si2C has shattered down all the confidence. Thus, an obvious question irises how to decide the reliability of GAUSSIAN data, when laboratory data are not available. Further, when the laboratory data are available, no one would like to use the GAUSSIAN data. We Sharma et al.16 have earlier presented some observations about the Quantum Chemistry software MOLPRO. Werner et al.17 About the computer code MOLSCAT Hutson et al.,18 we Sharma et al.19 have presented some observations. About the observations, someone may respond. - to be deleted These observations however - to be deleted provide some awareness to the users of the GAUSSIAN, MOLPRO and MOLSCAT.
Acknowledgments
Author is grateful to Hon’ble Dr. Ashok K. Chauhan, Founder President, Hon’ble Dr. Atul Chauhan, Chancellor, and Hon’ble Vice Chancellor Dr. Balvinder Shukla, Amity University for valuable support and encouragements. He is thankful to the SERB, DST, New Delhi for awarding the NPDF.
Conflict of interest
The author declares there is no conflict of interest.
References
- Becke AD. Density-functional thermochemistry. III. The role of exact exchange. The Journal of Chemical Physics. 1993;98:5648–5652.
- Lee C, Yang W, Parr RG. Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density. Phys Rev B Condens Matter. 1988;37(2):785–789.
- Guillemin JC, Wlodarczak G, Lopez JC. Millimeter-wave spectrum of cyclo- propenone, C3H2O. Journal of Molecular Spectroscopy. 1990;140:190–192.
- Sharma MK, Sharma M, Chandra S. Suggestion for search of cyclopropenone (c-C3H2O) in a cosmic object. Molecular Astrophysics. 2017;6:1–8.
- Frisch MJ. Gaussian Inc., Wallingfort CT. 2010.
- Sharma MK, Mushrif PG, Sharma M, Chandra S. Suggestion for the search for TiH2 molecule in an interstellar molecular cloud. Astronomische Nachrichten. 2017;338(6):715–719.
- Pan J, Albert S, Sastry KVLN, De Lucia FC. The Millimeter- and Submillimeter-Wave Spec- trum of Ethylene Oxide (c-C2H4O). The Astrophysical Journal. 1998;499:517–519.
- Sharma MK, Sharma M, Chandra S. Suggestion for search of ethylene oxide (c-C2H4O) in a cosmic object. Astrophysics and Space Science. 2018;363:94–101.
- Sharma MK, Sharma M, Chandra S. Strengths of rotational lines from H2CC molecule: Ad- dressing tentative detection. Molecular Astrophysics. 2018;12:20–24.
- Bailleux S, Bogey M, Demuynck C. Millimeter-wave rotational spectrum of H2SiO. The Journal of Chemical Physics. 1994;101:2279–2733.
- Sharma MK, Sharma M, Chandra S. Suggestion for search of silanone (H2SiO) in interstellar medium. Advances in Space Research. 2018.
- Winnerwisser M, Winnewisser BP, Stein M, et al. Rotational Spectra of cis-HCOOH, trans-HCOOH, and trans- H13COOH. Journal of Molecular Spectroscopy. 2002;216(2):259–265.
- Sharma MK. Transfer of radiation in the formic acid - a precursor for amino acids. Advances in Space Research. 2017.
- McCarthy MC, Joshua H Baraban, Joshua H Baraban, et al. Discovery of a Missing Link: Detection and Structure of the Elusive Disilicon Carbide Cluster. Journal of Physical Chemistry Letters. 2015;6(11):2107–2111.
- Sharma MK. The Disilicon carbide (Si2C) molecule in interstellar medium. Molecular Astrophysics. 2017.
- Sharma MK, Sharma M, Chandra S. Some observations about MOLPRO. Physics & Astronomy International Journal. 2018;2(4):286–288.
- Werner HJ, Knowles PJ. MOLPRO. Abilities program (2008, 2015). 2018. 1–737.
- Hutson JM, Green S. MOLSCAT Computer CODE, Version 14 (1994) Distributed by Collaborative Computational Project No. 6. The Engnieering and Physical Sciences Research Council (UK). 1994.
- Sharma MK, Sharma M, Chandra S. Some Observations about the MOLSCAT. Communications in Theoretical Physics. 2015;64:731–734.
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