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eISSN: 2576-4543

Physics & Astronomy International Journal

Research Article Volume 3 Issue 6

Unrestricted hartree-fock computational simulation in a protonated rhodochrosite crystal

Ricardo Gobato,1 Marcia Regina Risso Gobato,2 Alireza Heidari,3 Abhijit Mitra4

1Laboratory of Biophysics and Molecular Modeling Genesis, State Secretariat of Education of Parana, Brazil
2Green Land Landscaping and Gardening, Seedling Growth Laboratory, Brazil
3Faculty of Chemistry, California South University, USA
4Department of Marine Science, University of Calcutta, India

Correspondence: Ricardo Gobato, Laboratory of Biophysics and Molecular Modeling Genesis, State Secretariat of Education of Parana, Brazil

Received: October 01, 2019 | Published: November 6, 2019

Citation: Gobato R, Gobato MRR, Heidari A, et al. Unrestricted hartree-fock computational simulation in a protonated rhodochrosite crystal. Phys Astron Int J.2019;3(6):220-228. DOI: 10.15406/paij.2019.03.00187

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Abstract

In this paper, compact effective potentials, charge distribution, Atomic Polar Tensor (APT) and Mulliken charges were studied using a unrestricted Hartree-Fock computational simulation in a protonated rhodochrosite crystal. The rhodochrosite crystal unit cell of structure CMn6O8, where the charge distribution by the molecule was verified in the UHF CEP-4G (Effective core potential (ECP) minimal basis), UHF CEP-31G (ECP split valance) and UHF CEP-121G (ECP triple-split basis). The largest load variation in the APT and Mulliken methods were obtained in the CEP-121G basis set, with δ=2.922 e δ=2.650 u.a., respectively, being δAPT> δMulliken. The maximum absorbance peaks in the CEP-4G, CEP-31G and CEP-121G basis set are present at the frequencies 2172.23 cm-1, with a normalized intensity of 0.65; 2231.4 cm-1 and 0.454; and 2177.24 cm-1 and 1.0, respectively. An in-depth study is necessary to verify the absorption by the tumoral and non-tumoral tissues of rhodochrosite, before and after irradiating of synchrotron radiation using Small–Angle X–Ray Scattering (SAXS), Ultra–Small Angle X–Ray Scattering (USAXS), Fluctuation X–Ray Scattering (FXS), Wide–Angle X–Ray Scattering (WAXS), Grazing–Incidence Small–Angle X–Ray Scattering (GISAXS), Grazing–Incidence Wide–Angle X–Ray Scattering (GIWAXS), Small–Angle Neutron Scattering (SANS), Grazing–Incidence Small–Angle Neutron Scattering (GISANS), X–Ray Diffraction (XRD), Powder X–Ray Diffraction (PXRD), Wide–Angle X–Ray Diffraction (WAXD), Grazing– Incidence X–Ray Diffraction (GIXD) and Energy–Dispersive X–Ray Diffraction (EDXRD). Later studies could check the advantages and disadvantages of rhodochrosite in the treatment of cancer through synchrotron radiation, such as one oscillator crystal.

Keywords: rhodochrosite, quartz crystal, hartree-fock methods, apt, mulliken, effective core potential, synchrotron radiation, cancer, tumoral tissues

Abbreviations

APT, atomic polar tensor; ECP, effective core potential; SAXS, small–angle X–ray scattering; USAXS, ultra–small angle X–ray scattering; FXS, X–ray scattering; WAXS, wide–angle X–ray scattering; GISAXS, grazing–incidence small–angle X–ray scattering; GIWAXS, grazing–incidence wide–angle X–ray scattering; SANS, small–angle neutron scattering; GISANS, grazing–incidence small–angle neutron scattering; XRD, X–ray diffraction; PXRD, powder X–ray diffraction; WAXD, wide–angle X–ray diffraction; GIXD grazing– incidence X–ray diffraction; EDXRD, energy–dispersive X–ray diffraction

Introduction

The rhodochrosite as crystal oscillator for being an alternative to those of quartz. The rhodochrosite (MnC03) shows complete solid solution with siderite (FeC03), and it may contain substantial amounts of Zn, Mg, Co, and Ca. The electric charge that accumulates in certain solid materials, such as crystals, certain ceramics, and biological matter such as bone, DNA and various proteins in response to applied mechanical stress, phenomenon called piezoelectricity.1 Through an unrestricted Hartree-Fock (UHF) computational simulation, Compact effective potentials (CEP), the infrared spectrum of the protonated rhodochrosite crystal, CH19Mn6O8, and the load distribution by the unit molecule by two widely used methods, Atomic Polar Tensor (APT) and Mulliken, were studied. The rhodochrosite crystal unit cell of structure CMn6O8, where the load distribution by the molecule was verified in the UHF CEP-4G (Effective core potential (ECP) minimal basis), UHF CEP-31G (ECP split valance) and UHF CEP-121G (ECP triple-split basis).

The electronic oscillator circuit that uses the mechanical resonance of a vibrating crystal of piezoelectric material to create an electrical signal with a precise frequency is a crystal oscillator. The most common type of piezoelectric resonator used is the quartz crystal, so oscillator circuits incorporating them became known as crystal oscillators.2 Quartz crystals are manufactured for frequencies from a few tens of kilohertz to hundreds of megahertz. More than two billion crystals are manufactured annually. Most are used for consumer devices such as wristwatches, clocks, radios, computers, cellphones, signal generators and oscilloscopes.3–12 But other crystals such as rhodochrosite also have piezoelectric properties. The rhodochrosite as crystal oscillator for being an alternative to those of quartz. The rhodochrosite (MnC03) shows complete solid solution with siderite (FeC03), and it may contain substantial amounts of Zn, Mg, Co, and Ca. The Kutnohorite [CaMn(C03)2] is a dolomite group mineral intermediary between rhodochrosite and calcite.3–12 The Figure 1 is one photography the Rhodochrosite stone from China.

Figure 1 Rhodochrosite stone from China.13

Methods

Hartree-Fock methods

The Hartree-Fock self–consistent method14–20 is based on the one-electron approximation in which the motion of each electron in the effective field of all the other electrons is governed by a one-particle Schrodinger¨ equation. The Hartree-Fock approximation takes into account of the correlation arising due to the electrons of the same spin, however, the motion of the electrons of the opposite spin remains uncorrelated in this approximation. The methods beyond self-consistent field methods, which treat the phenomenon associated with the many-electron system properly, are known as the electron correlation methods. The vast literature associated with these methods suggests that the following is a plausible hierarchy:

HF << MP2 < CISD < CISD < CISD  (T) <  FCI

The extremes of ‘best’, FCI, and ‘worst’, HF, are irrefutable, but the intermediate methods are less clear and depend on the type of chemical problem being addressed.14 The use of HF in the case of FCI was due to the computational cost. The molecular Hartree-Fock wave function is written as an antisymmetrized product (Slater determinant) of spin-orbitals, each spin-orbital being a product of a spatial orbital ϕi and a spin function (either α or β). The expression for the Hartree-Fock molecular electronic energy EHF  is given by the variation theorem as EHF=D|ˆHel+VNN|D  where D is the Slater-determinant Hartree-Fock wave function and ˆHel and VNN are given by

ˆHel= ħ22mei2iαiZαe'2riα+ ji>je'2rij

VNN= αβ>αZαZβe'2rαβ

Since VNN does not involve electronic coordinates and D is normalized, we have D|VNN|D=VNND|D=VNN . The operator ˆHel is the sum of one-electron operators ˆfi and two-electron operators ˆgij; we have ˆHel= iˆfi+ji>jˆgij , where ˆfi=122iαα/ria  and ˆgij=1rij. The Hamiltonian ˆHel is the same as the Hamiltonian ˆH  for an atom except that αα/ria replaces Z/ri in ˆfi Hence

E=D | ˆH | D=2n/2i  ϕi(1)|ˆfi|ϕi(2)+n/2j=1  n/2i=1   (2JijKij)

where

Jij= ϕi(1)ϕj(2)|e'2/r12|ϕi(1)ϕj(2)

And

Kij= ϕi(1)ϕj(2)|e'2/r12|ϕj(1)ϕi(2)

ˆfi= (ħ2/2me)2i Ze'2/r1

can be used to give D|ˆHel|D.

Therefore, the Hartree-Fock energy of a diatomic or polyatomic molecule with only closed shells is

EHF= 2n/2i=1Hcorei + n/2j=1n/2i=1(2JijKij)+ VNN

Hcorei   ϕi(1)|ˆHcore(1)|ϕi(1)  ϕi(1)|122i αZα/r1α|ϕi(1)

Jij ϕi(1)ϕj(2)|1/r12|ϕi(1)ϕj(2)

and

Kij ϕi(1)ϕj(2)|1/r12|ϕj(1)ϕi(2)

where the one-electron-operator symbol was changed from ˆfi  to ˆHcore(1). 5

Mulliken load

Mulliken's loads are derived from the Mulliken population analysis and provide means for estimating partial atomic charges from numerical chemistry calculations, particularly those based on the linear combination of atomic orbitals. If the coefficients of the basic functions in the molecular orbital are Cμi for μe the basic function ie in the orbital molecular, the coefficients of the density matrix are:

Dμν =2  iCμiC*υi

for a compact closed system in which each molecular orbital is doubly occupied. The population matrix P therefore has the following coefficients:

Pμν=(DS)μν

S is the overlay matrix for basic functions. The sum of the set of terms of Pμν is N - the total number of electrons. The Mulliken population analysis aims first of all to distribute the N electrons on all the basic functions. This is done by taking the diagonal elements of Pμν and factorizing the non-diagonal elements equally between the two appropriate basic functions. Non-diagonal terms including Pμν and Pνμ this simplifies the operation to a sum on a line. This defines the gross orbital population (GOB) as:

GOPμ= νPμν

The terms GOPμ lie on N and then divide the total number of electrons between the basic functions. It then remains to sum these terms on all the basic functions of a given atom A in order to obtain the gross atomic population (GAP). The integral of the GAPA terms also gives N. The load, QA, is then defined as the difference between the number of electrons on the free isolated atom, which is the atomic number ZA, and the raw atomic population:

QA= ZA GAPA

The problem with this approach is the even distribution of non-diagonal terms between the two basic functions. This leads to charge separations between the molecules that are exaggerated. Many other methods are used to determine atomic charges in molecules.21,22 Concerning the nuclear contribution, the nuclear charge ZA can be written as ZA=qA+QA,  where qA and QA  account for the Mulliken net and gross atomic charge.21 According to the Mulliken population analysis, the nuclear charge for A can be written as

ZA= qA+ μ PμμSμμ+ μ<υ 2PμυSμυ+ 12BAA  μB  ν2PμυSμυ

which upon substitution in the dipole moment expression yields

ˆpx= AμPμμXA Aμ<ν2Pμυϕμ|x|ϕυ A<BAμBν2Pμυϕμ|x|ϕυ+ AqAXA    + AμPμμSμμXA + Aμ<ν2PμνSμνXA + 12ABAμBν2PμυSμυXA

Note that SμυXA= ϕμ|x|ϕυ and Sμυ=1 so that

ˆpx= + AqAXA Aμ<ν2PμνSμνˉxAμν  A<BAμBν2PμυˉxABμν 

where

ˉxAμν= ϕμ|xXA|ϕυ

and

ˉxABμν= ϕμ|x XA +XB2|ϕυ

The first two terms in eq. for ˆpx are of atomic origin where the first one, involving the net atomic charge, is the only term with a classical counterpart. The second term resembles Coulson’s atomic dipole, and the integral ˉxAμν is the distance from the centroid of the hybrid orbital to nucleus A. For the third term, the integral ˉxABμν= is the distance of the center of charge from the midpoint of the chemical bond A-B. This contribution to the dipole moment has been referred to as the homopolar dipole21 by Mulliken. As can be seen, the dipole moment has been partitioned into three contributions: the net atomic charge, the atomic dipole, and the homopolar dipole. Since the density matrix is invariant with respect to the choice of origin and since the sum of all net atomic charges vanishes, this partitioning of the dipole moment does not depend on the choice of origin for the system.5,23

Atomic polar tensor (APT)

One of the most useful methods for interpreting and predicting infrared intensities comes from the atomic polar tensor (APT) formalism.24,25 In the APT framework, the derivative of the molecular dipole moment vector with respect to the ith normal coordinate (which is directly related to the infrared intensity of the ith fundamental mode), can be expressed as

pQi= αξpξi[AU1L]ξα,i

For each atom α in molecule, the quantities pτξα= Pτξ where τ=x, y, z and ξ=X,Y,Z form the APT, represent by a 3×3  matrix p(α)x

p(α)x=αp

So, if all the experimental infrared intensities and normal coordinates are known as well as the permanent dipole moment for a given molecule, the APT can be determined. On the other hand, these APTs can also be calculated by the SCF method and used to predict infrared intensities. These intensities can then be interpreted by partitioning the APT. This has been done before in the "charge-charge flux-overlap" (CCFO) model, first introduced by King and Mast26,27 and later applied by Person et al.28

The general expression for the APT is:

αp= qαE+ A(αqA)RA Aμ<υ(2PμυˉRAμν)  A<BAμBν2PμυˉxABμν

where E is the identity matrix and each term of the APT is represented by a 3 X 3 matrix. The four contributions in the above equation can be identified according to Person, Coulson, and Mulliken terminology as charge, charge flux, atomic dipole flux, and homopolar dipole flux. Comparing with the CCFO model, the difference introduced in this work lies in the fact that the overlap term has been decomposed into two flux contributions (atomic dipole and homopolar dipole fluxes).

In eq. for αp, the first two terms are the only classical contributions, one of them being the Mulliken net charge of atom a in its equilibrium position, Rα, and the other being the "charge flux" corresponding to charge migration as the chemical bond involving the α atom has been distorted. The sum over all atoms, A, implies there is electronic density deformation involving all the atoms in the molecule. These two terms have already been well discussed by Person, Zilles, and other28,29,30 The atomic dipole flux can be separated into two parts if the gradient of the density matrix and center of charge integrals are taken inside the parentheses:

 αμ<ν2Pμυα(ˉRAμν)

and

 AAμ<ν2(Pμυα)ˉRAμν

the first of the two terms in equation

 AAμ<ν2(Pμυα)ˉRAμν

 involves only the atom for which the APT is being calculated because only these ϕ's depend on  (r Rα).

Hardware and software

For calculations a computer models was used: IntelÒ CoreTM i3-3220 CPU @ 3.3 GHz x 4 processors,31 Memory DDR3 4 GB, HD SATA WDC WD7500 AZEK-00RKKA0 750.1 GB and DVD-RAM SATA GH24NS9 ATAPI, Graphics Intel Ivy Bridge.32 For calculations of computational dynamics, the Ubuntu Linux version 16.10 system was used33 and the software used for the molecular dynamics was GAMESS.16,34

Results

The Figure 2 show on cell structure of a protonated rhodochrosite crystal of structure Stoichiometric is CH19Mn6O8, obtained after molecular dynamics via unrestricted Hartree-Fock method, in basis set CEP-4G, CEP-31G and CEP-121G.35–96 The Figure 3A–D) show the normalized absorption spectrum as a function of the vibrational frequencies of the protonated rhodochrosite crystal for UHF-CEP-4G basis set, UHF-CEP-31G and UHF-CEP-121G. The rhodochrosite crystal unit cell of structure CMn6O8, where the load distribution by the molecule was verified in the unrestricted Hartree-Fock method, UHF CEP-4G (Effective core potential (ECP) minimal basis), UHF CEP-31G (ECP split valance) and UHF CEP-121G (ECP triple-split basis), through the analysis of APT and Mulliken loads.97–102 The rhodochrosite unit cell was protonated, then presented the structure CH19Mn6O8 for the study with ab initio methods with +4 multiplicity. The displacement of charges by the molecule was analyzed to verify the site of molecular action. The load distribution by the protonated crystal is evaluated in Table 1, and its vibrational frequencies in Table 2. The Table 2 show the maximum absorbance peaks in the CEP-4G, CEP-31G and CEP-121G set basis are present at the frequencies 2172.23 cm-1, with a normalized intensity of 65%; 2231.4 cm-1 and 45.4%; and 2177.24 cm-1 and 100%, respectively.

Figure 2 Cell structure of a protonated rhodochrosite crystal. Represented in red the oxygen; silver in color Manganese; in gray color Hydrogen; in light see green color the Carbon. Stoichiometry:   CMn6O8. Stoichiometry  protonated: CH19Mn6O8.

Figure 3A Absorbance spectrum plot as a function of vibrational frequencies of protonated rhodochrosite crystal for UHF-CEP-4G basis set.

Figure 3B Absorbance spectrum plot as a function of vibrational frequencies of protonated rhodochrosite crystal for UHF-CEP-31G basis set.

Figure 3C Absorbance spectrum plot as a function of vibrational frequencies of protonated rhodochrosite crystal for UHF-CEP-121G basis set.

Figure 3D Absorbance spectrum plot as a function of vibrational frequencies of protonated rhodochrosite crystal for UHF-CEP-4G basis set, UHF-CEP-31G and UHF-CEP-121G.

Basis Sets

Mulliken

   

APT

   
 

Charge*

 

δ

Charge*

 

δ

CEP-4G

-1.064

1.064

2.128

-1.366

1.366

2.732

CEP-31G

-1.034

1.034

2.068

-1.362

1.362

2.724

CEP-121G

-1.325

1.325

2.65

-1.461

1.461

2.922

Table 1 Load shifting on given basis sets of the Mulliken and APT method
*±1,602 176 634×10−19 C (Coulomb).

 

ν  (cm-1)

I (%)

ν  (cm-1)

I (%)

ν  (cm-1)

I (%)

ν  (cm-1)

I (%)

CEP-4G

2172.23

64.9904

2043.25

51.7671

2193.1

41.6608

2242.97

36.4643

CEP-31G

2231.4

45.3589

1891.26

41.6207

2027.77

40.3978

1926.32

38.0064

CEP-121G

2177.24

100

2261.98

87.0553

1947.03

83.1151

1778.57

51.6624

Table 2 Peaks maximum absorption intensity by the frequency given. Absorbance frequency as a function of vibrational frequencies of protonated rhodochrosite crystal for UHF-CEP-4G basis set, UHF-CEP-31G and UHF-CEP-121G
ν=Frequency (cm-1); I=Normalized Intensity (%).

Analysis

The Mulliken load method in the UHF-CEP-4G base set; UHF-CEP-31G and UHF-CEP-121G are sufficient to show that the sites of action of the rhodochrosite crystal structure are found in three Oxygen-linked Manganese atoms, which are attached to the central Carbon atom, as well as these. Oxygen atoms and the central Carbon. These Manganese atoms show a slight negative to neutral load shift in the CEP-4G set basis, neutral to positive in the CEP-31G and CEP-121G set basis at the Mulliken charges, (Figure 4). The charge displacement is strong in the oxygen atoms, especially those near the central carbon, with negative load in all set basis studied, both in the APT and Mulliken charges. The central carbon atom on all set basis is positively charged in both APT and Mulliken load, except Milliken in CEP-31G, which is neutral. As might be expected from the charges by APT, the strong positive load manganese atoms, the strong negative load oxygen, the positively charged carbon atom. The manganese atom farthest from the carbon atom has a slight positive to neutral load shift. The Mulliken load method presents a better result when compared to the APT, in the studied set basis, for protonated rhodochrosite crystal, with a smaller load variation δ=2,650 u.a for CEP-121G. The absorption peaks are in a Gaussian between the frequencies 1620 cm-1 and 2520 cm-1, Figure 3D. The largest load variation in the APT and Mulliken methods were obtained in the CEP-121G base set, with δ=2.922 e δ=2.650, respectively, being δAPT > δMulliken, in all sets of calculated basis, (Table 1).

Figure 4 UHF-CEP-4G; UHF-CEP-31G and UHF-CEP-121G for APT and Mulliken.

Conclusion

The absorption peaks are in a Gaussian between the frequencies 1620 cm-1 and 2520 cm-1. The Mulliken load method presents a better result when compared to the APT, in the studied set basis, for protonated rhodochrosite crystal, with a smaller load variation δ=2,650 u.a for CEP-121G. The maximum absorbance peaks in the CEP-4G, CEP-31G and CEP-121G set basis are present at the frequencies 2172.23 cm-1, with a normalized intensity of 0.65, 2231.4 cm-1 and 0.454 and 2177.24 cm-1 and 1.0 respectively. Later studies could check the advantages and disadvantages of rhodochrosite in the treatment of cancer through synchrotron radiation, such as one oscillator crystal. An in-depth study is necessary to verify the absorption by the tumoral and non-tumoral tissues of rhodochrosite, before and after irradiating of synchrotron radiation using Small–Angle X–Ray Scattering (SAXS), Ultra–Small Angle X–Ray Scattering (USAXS), Fluctuation X–Ray Scattering (FXS), Wide–Angle X–Ray Scattering (WAXS), Grazing–Incidence Small–Angle X–Ray Scattering (GISAXS), Grazing–Incidence Wide–Angle X–Ray Scattering (GIWAXS), Small–Angle Neutron Scattering (SANS), Grazing–Incidence Small–Angle Neutron Scattering (GISANS), X–Ray Diffraction (XRD), Powder X–Ray Diffraction (PXRD), Wide–Angle X–Ray Diffraction (WAXD), Grazing– Incidence X–Ray Diffraction (GIXD) and Energy–Dispersive X–Ray Diffraction (EDXRD).

Acknowledgments

None.

Conflicts of interest

The author declares there is no conflict of interest.

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  44. R Gobato, DFG Fedrigo, A Gobato. LOT-G3: Plasma Lamp, Ozonator and CW Transmitter. Ciencia e Natura. 2016;38(1).
  45. R Gobato. Matter and energy in a non-relativistic approach amongst the mustard seed and the faith. A metaphysical conclusion. Parana J Sci Educ. 2016;2(3):1–14.
  46. R Gobato, A Gobato, DFG Fedrigo. Harnessing the energy of ocean surface waves by Pelamis System. Parana J Sci Educ. 2016;2(2):1–15.
  47. R Gobato, A Gobato, DFG Fedrigo. Mathematics for input space probes in the atmosphere of Gliese 581d. Parana J Sc. Educ. 2016;2(5):6–13.
  48. R Gobato, A Gobato, DFG Fedrigo. Study of tornadoes that have reached the state of Parana. Parana J Sci Educ. 2016;2(1):1–27.
  49. R Gobato, M Simões F. Alternative Method of RGB Channel Spectroscopy Using a CCD Reader. Ciencia e Natura. 2017;39(2):1–9.
  50. R Gobato, A Heidari. Calculations Using Quantum Chemistry for Inorganic Molecule Simulation BeLi2SeSi. Science Journal of Analytical Chemistry. 2017;5(5):76–85.
  51. R Gobato. O universo dos cristais líquidos”, Cadernos PDE, Secretaria de Estado da Educação do Paraná. 2009; 2:1–15
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  53. R Gobato, A Heidari. Calculations Using Quantum Chemistry for Inorganic Molecule Simulation BeLi2SeSi. Science Journal of Analytical Chemistry. 2017;5(6):76–85.
  54. MRR Gobato, R Gobato, A Heidari. Planting of Jaboticaba Trees for Landscape Repair of Degraded Area. Landscape Architecture and Regional Planning. 2018;3(1):1–9.
  55. R Gobato, A Heidari. Molecular Mechanics and Quantum Chemical Study on Sites of Action of Sanguinarine Using Vibrational Spectroscopy Based on Molecular Mechanics and Quantum Chemical Calculations. Malaysian Journal of Chemistry. 2018;20(1):1–23.
  56. A Heidari, R Gobato. A Novel Approach to Reduce Toxicities and to Improve Bioavailabilities of DNA/RNA of Human Cancer Cells–Containing Cocaine (Coke), Lysergide (Lysergic Acid Diethyl Amide or LSD), Δ⁹–Tetrahydrocannabinol (THC) [(–)–trans–Δ⁹–Tetrahydrocannabinol], Theobromine (Xantheose), Caffeine, Aspartame (APM) (NutraSweet) and Zidovudine (ZDV) [Azidothymidine (AZT)] as Anti–Cancer Nano Drugs by Coassembly of Dual Anti–Cancer Nano Drugs to Inhibit DNA/RNA of Human Cancer Cells Drug Resistance. Parana Journal of Science and Education. 2018;4(6):1–17.
  57. A Heidari, R Gobato. Ultraviolet Photoelectron Spectroscopy (UPS) and Ultraviolet–Visible (UV–Vis) Spectroscopy Comparative Study on Malignant and Benign Human Cancer Cells and Tissues with the Passage of Time under Synchrotron Radiation. Parana Journal of Science and Education. 2018; 4(6):8–33.
  58. R Gobato, A Heidari. Using the Quantum Chemistry for Genesis of a Nano Biomembrane with a Combination of the Elements Be, Li, Se, Si, C and H. J Nanomed Res. 2018;7(4):241–252.
  59. SK Agarwal, S Roy, P Pramanick, et al. Marsilea quadrifolia: A floral species with unique medicinal properties.  Parana J Sci Educ. 2018;4(5):15–20.
  60. A Mitra, S Zaman, R Gobato. Indian Sundarban Mangroves: A potential Carbon Scrubbing System. Parana J Sci Educ. 2018;4(4):7–29.
  61. O Yarman, R Gobato, T Yarman. A new Physical constant from the ratio of the reciprocal of the “Rydberg constant” to the Planck length. Parana J Sci Educ. 2018;4(3):42–51.
  62. R Gobato, M Simões F. Alternative Method of Spectroscopy of Alkali Metal RGB. Modern Chemistry. 2017;5(4):70–74.
  63. DFG Fedrigo, R Gobato, A Gobato. Avrocar: a real flying saucer”, Cornell University Library. 2015;arXiv:1507.06916v1.
  64. M Simões F, AJ Palangana, R Gobato, et al. Micellar shape anisotropy and optical indicatrix in reentrant isotropic-nematic phase transitions. The Journal of Chemical Physics. 2012;137:204905.
  65. A Heidari, R Gobato. Putrescine, Cadaverine, Spermine and Spermidine–Enhanced Precatalyst Preparation Stabilization and Initiation (EPPSI) Nano Molecules. Parana Journal of Science and Education (PJSE). 2018;4(5):1–14.
  66. R Gobato, A Heidari. Molecular Mechanics and Quantum Chemical Study on Sites of Action of Sanguinarine Using Vibrational Spectroscopy Based on Molecular Mechanics and Quantum Chemical Calculations. Malaysian Journal of Chemistry. 2018;20(1):1–23.
  67. R Gobato, A Heidari, A Mitra. The Creation of C13H20BeLi2SeSi. The Proposal of a Bio–Inorganic Molecule, Using Ab Initio Methods for the Genesis of a Nano Membrane. Arc Org Inorg Chem Sci. 2018;3(4):AOICS.MS.ID.000167.
  68. R Gobato, A Heidari, A Mitra. Using the Quantum Chemistry for Genesis of a Nano Biomembrane with a Combination of the Elements Be, Li, Se, Si, C and H. Semantic Scholar. 2018.
  69. A Heidari, R Gobato. First–Time Simulation of Deoxyuridine Monophosphate (dUMP) (Deoxyuridylic Acid or Deoxyuridylate) and Vomitoxin (Deoxynivalenol (DON)) ((3α,7α)–3,7,15–Trihydroxy–12,13–Epoxytrichothec–9–En–8–One)–Enhanced Precatalyst Preparation Stabilization and Initiation (EPPSI) Nano Molecules Incorporation into the Nano Polymeric Matrix (NPM) by Immersion of the Nano Polymeric Modified Electrode (NPME) as Molecular Enzymes and Drug Targets for Human Cancer Cells, Tissues and Tumors Treatment under Synchrotron and Synchrocyclotron Radiations. Parana Journal of Science and Education. 2018;4(6):46–67.
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  72. R Gobato, MRR Gobato, A Heidari. Raman Spectroscopy Study of the Nano Molecule C13H20BeLi2SeSi Using ab initio and Hartree–Fock Methods in the Basis Set CC–pVTZ and 6–311G** (3df, 3pd). International Journal of Advanced Engineering and Science. 2019;7(1):14–35.
  73. A Heidari, R Gobato. Evaluating the Effect of Anti–Cancer Nano Drugs Dosage and Reduced Leukemia and Polycythemia Vera Levels on Trend of the Human Blood and Bone Marrow Cancers under Synchrotron Radiation. Trends in Res. 2019;2(1):1–8.
  74. A Heidari, R Gobato. Assessing the Variety of Synchrotron, Synchrocyclotron and LASER Radiations and Their Roles and Applications in Human Cancer Cells, Tissues and Tumors Diagnosis and Treatment. Trends in Res. 2019;2(1):1–8.
  75. A Heidari, R Gobato. Pros and Cons Controversy on Malignant Human Cancer Cells, Tissues and Tumors Transformation Process to Benign Human Cancer Cells, Tissues and Tumors. Trends in Res. 2019;2(1):1–8.
  76. A Heidari, R Gobato. Three–Dimensional (3D) Simulations of Human Cancer Cells, Tissues and Tumors for Using in Human Cancer Cells, Tissues and Tumors Diagnosis and Treatment as a Powerful Tool in Human Cancer Cells, Tissues and Tumors Research and Anti–Cancer Nano Drugs Sensitivity and Delivery Area Discovery and Evaluation. Trends in Res. 2019;2(1):1–8.
  77. A Heidari, R.Gobato. Investigation of Energy Production by Synchrotron, Synchrocyclotron and LASER Radiations in Human Cancer Cells, Tissues and Tumors and Evaluation of Their Effective on Human Cancer Cells, Tissues and Tumors Treatment Trend. Trends in Res. 2019;2(1):1–8.
  78. A Heidari, R. Gobato. High–Resolution Mapping of DNA/RNA Hypermethylation and Hypomethylation Process in Human Cancer Cells, Tissues and Tumors under Synchrotron Radiation. Trends in Res. 2019;2(2):1–9.
  79. R Gobato, MRR Gobato, A Heidari. Storm Vortex in the Center of Paraná State on June 6, 2017: A Case Study. Sumerianz Journal of Scientific Research. 2019;2(2):24–31.
  80. R Gobato, MRR Gobato, A Heidari. Attenuated Total Reflection–Fourier Transform Infrared (ATR–FTIR) Spectroscopy Study of the Nano Molecule C13H20BeLi2SeSi Using ab initio and Hartree–Fock Methods in the Basis Set RHF/CC– pVTZ and RHF/6–311G** (3df, 3pd): An Experimental Challenge to Chemists. Chemistry Reports. 2019;2(1):1–26.
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  82. R Gobato, MRR Gobato, A Heidari. Evidence of Tornado Storm Hit the Counties of Rio Branco do Ivaí and Rosario de Ivaí, Southern Brazil. Sci Lett. 2019;7(1):9.
  83. Moharana Choudhury, Pardis Fazli, Prosenjit Pramanick, et al. Sensitivity of the Indian Sundarban mangrove ecosystem to local level climate change. Parana Journal of Science and Education. 2019;5(3):24–28.
  84. Arpita Saha, Ricardo Gobato, Sufia Zaman. Biomass Study of Mangroves in Indian Sundarbans: A Case Study from Satjelia Island. Parana Journal of Science and Education. 2019;5(2):1–5.
  85. Nabonita Pal, Arpan Mitra, Ricardo Gobato, et al. Natural Oxygen Counters in Indian Sundarbans, the Mangrove Dominated World Heritage Site. Parana Journal of Science and Education. 2019;5(2):6–13.
  86. Ricardo Gobato, Victoria Alexandrovna Kuzmicheva, Valery Borisovich Morozov. Einstein's hypothesis is confirmed by the example of the Schwarzschild problem. Parana Journal of Science and Education. 2019;5(1):1–6.
  87. Sufia Zaman, Ricardo Gobato, Prosenjit Pramanick, et al. Water quality of the River Ganga in and around the city of Kolkata during and after Goddess Durga immersion. Parana Journal of Science and Education. 2018;4(9):1–7.
  88. Ozan Yarman, Metin Arik, Ricardo Gobato, et al. Clarification of “Overall Relativistic Energy” According to Yarman’s Approach. Parana Journal of Science and Education. 2018;4(8):1–10.
  89. Sufia Zaman, Utpal Pal, Ricardo Gobato, et al. The Changing Trends of Climate in Context to Indian Sundarbans. Parana Journal of Science and Education. 2018;4(7):24–28.
  90. Suresh Kumar Agarwal, Sitangshu Roy, Prosenjit Pramanick, et al. Marsilea quadrifolia: A floral species with unique medicinal properties. Parana Journal of Science and Education. 2018;4(5):15–20.
  91. Ricardo Gobato, Marcia Regina Risso Gobato. Evidence of Tornadoes Reaching the Countries of Rio Branco do Ivai and Rosario de Ivai, Southern Brazil on June 6, 2017. Climatol Weather Forecasting. 2018;6:4.
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