To understand the soil health under continuous cultivation after using organic and chemical inputs, a survey was conducted under Uttarakhand, Navdanya farm areas, where farmers was selected who were practicing both chemical and organic inputs under different crops at least more than 5 years. The effect of most important crops growing under Uttarakhand i.e wheat, potato, garlic, mustard, chick pea, chilli and pumpkin was taken into consideration. The results clearly suggested that a significant decline in most important soil enzyme activities like dehydrogenase, esterase, acid and alkaline phosphatase under chemical farming as compared to organic farming. The microbial population especially fungi, bacteria, actinomycetes, azotobacter and nitrosomonas was significantly higher under organic farming areas than chemical farming. The results clearly showed that organic farming has a great role to maintain excellent microbial and enzyme activities resulted better soil health status.
Keywords: soil health, organic input, chemical input, conventional farming, enzyme activity, microbial build up
Agriculture is a critical sector of Indian economy. Increased use of chemicals, under intensive cultivation has disturbed the harmony existing among soil, plant and human health.1 Farmers are perusing chemical supplements to push crop yield, which is only harming the earth. Farmers and communities faced many socio-economic problems, particularly small farmers who found themselves increasingly marginalized due to lack of access to external inputs. Their soil is depleted from the constant application of harsh and harmful chemicals. The role of organic agriculture is to either enhance or sustain the overall quality and health of the soil ecosystem.2 Agricultural sustainability depends on productive soil. During the last several decades, much research has focussed on increasing productivity and protecting environmental quality under different farming systems. These studies show that conventional farming’s use of chemical fertilizers and pesticides has increased crop yields and enhanced food security around the globe.3
However, despite the high yields associated with it, conventional farming’s ability to sustain soil fertility and environmental quality has been called into question.3 Conventional farming systems are reported to be associated with decline in soil structure and soil aggregation, a decrease in water infiltration, an increase in soil bulk density, soil salinity, nitrogen leaching and ground water contamination.4,5 High soil quality is associated with efficient use of water, nutrients and pesticides, improvement of water and air quality, mitigation of green house gas emission, and increase in organic production.6 According to Scow et al.7 it takes about three to five years to stabilize soil properties following conversion from conventional to organic farming, and yields during the conversion period are often lower than those achieved later. Physical, chemical, biological and biochemical properties are involved in soil functioning, biological and biochemical properties tend to react quickly to changes in the external environment.8,9 Soil microbes play vital role in the biochemical cycling of elements in the biosphere where the essential elements undergo chemical transformation. Soil microorganisms, such as bacteria and fungi, control the functioning of ecosystem through decomposition and nutrient cycling which in turn may serve as ecosystem health.10–12 Organic farming has improved food quality and safety, because the nutrient supply and pest control methods are largely depend on biological processes in organic systems.13 It has been reported,14 that the soil enzyme activities and microbial population are higher in organically managed farming when compared to the conventional and integrated managed farming.
To determine a farming system’s sustainability, an integrated assessment of biological soil health is essential on a field scale with continuous farming practice. Therefore, there is a need to clearly understand the net effect on organic farming as compared to conventionally chemical farming on soil biological health. The present study has been undertaken to compare the changes in beneficial microbial and enzyme activities in continuous organic farming and inorganic farming practices fewer than seven important crops of Uttarakhand, India.
A survey work has been done at Uttarakhand (Navdanya farm surrounding areas 30.3165 °N and 78.0322°E) to understand the biological soil health in organic and chemical input growing areas. In general, between 8 and 20 years of same farming practice field (organic/chemical/no input) was considered for sampling. The total area covered for sampling under organic farming was 10.8 hectare and under chemical farming was 12.5 hectare of land. The soil samples were collected from the field of seven different crops (wheat, potato, garlic, mustard, chickpea, chilli, pumpkin) growing under absolutely organic farming, chemical farming and no-input condition. The treatments under organic farming were 4-6 tonnes FYM (Farm Yard Manure) or vermicompost per hectare and for chemical farming the recommended doses of NPK to the respective crops per hectare. The soil samples collected from the bunds (barren soils) was considered as absolute control. Four farmer’s field was selected for each type of cultivation under each crop. Ten samples in zig- zag way was collected from each field of 5-30 cm depth and mixed them thoroughly to prepare a composite sample. The soil biological parameters were considered as dehydrogenase, esterase, acid phosphatase and alkaline phosphatase activities as well as fungi, bacteria, actinomycetes, nitrosomonas and azotobacter population.
Dehydrogenase assay
It was measured in soils immediately after soil sampling or in stored soils at 4°C (within 15 days). The activity was assayed by the method of Tabatabai.15 One gram of soil sample in triplicate was taken in screw cap test tube (15mL capacity). To it, 0.2mL of 3% TTC and 0.5mL 1% glucose was added. After mixing the content, the tubes were incubated for 24h at 30°C. Once the process of incubation was over, 10mL of methanol was added to it. The entire material was mixed thoroughly (for a min). After mixing, the tubes were placed in refrigerator for 3h. The production of triphenyl formazon was determined by measuring absorbance at 485nm.
Acid and alkaline phosphatase activity
It was assayed by adopting the standard procedure.16 The procedure described for assay of phosphomonoestrase activities is based on colorimetric estimation of the p-nitrophenol released by phosphatase activity when soil is incubated with buffered (pH 5.4 for acid phosphatase and pH 9.2 for alkaline phosphatase) sodium p-nitrophenyl phosphate solution. One gram of soil in triplication were placed in 15mL capacity screw cap test tube, 4ml of p-nitrophenyl phosphate solution prepared in acetate buffer (pH 5.4 for assay of acid phosphatase) or borax-NaOH buffer (pH 9.2 for assay of alkaline phosphatase) was added and swirled the test tube for a few seconds to mix the contents. The test tube was covered with screw cap, and placed it in an incubator at 35°C. After 1h, the cap was removed and 1mL of 0.5M CaCl2 and 4mL of 0.5M NaOH was added. The test tube was swirled for few seconds and the soil suspension was filtered through a whatman no. 42 filter paper. The yellow colour intensity of the filtrate was measured spectrophotometrically at 420nm wave length.
Enzyme unit
The p-nitrophenol content of the filtrate was calculated against the standard curve wuith p-nitophenol. One unit is the amount of enzyme, which hydrolyses 1.0μ mole of p-nitrophenylphosphate per second at pH 5.4 (acid phosphatase) or pH 9.4 (alkaline phosphatase) at 35°C. Estimation of esterase activity was made as described by Schnuver & Rosswall.17 0.5 g of soil samples were placed in a (18×150) test tube in triplicate and 10 mL sterile potassium phosphate buffer (pH 7.6, 60mM) was added to it. One mL of fluorescent diacetate (1mg mL-1 in acetone) was poured and the tubes were sealed and kept in an incubtor at 37°C for 4 h. After that the reaction was stopped by addition of 10mL of acetone. The mixture was shacked and filtered through whatman No. 42 filter paper and the supernatant optical density was determined in 490 nm on spectrophotometer.
Microbial population
Microbial population was estimated by serial dilution technique18 using selective media as described.19
Statistical analysis
The data were subjected to analysis of various and the least significant differences (LSD) were used to separate means.20
Beneficial enzymes
The dehydrogenase activity indicates the activity of bacteria and actinomycetes in the soils under different growing conditions. The dehydrogenase activity under organic, chemical and no input conditions of seven different crops studied was presented in Table 1. The results (Table 1) clearly indicate that there was no significant difference in dehydrogenase activity in absolute control soil where no plants were growing. The dehydrogenase activity varies due to the farming practice and the crops under cultivation. The improvement in dehydrogenase activity, irrespective of crops, was much higher under organic than chemical farming (Figure 1). The much higher dehydrogenase activity (300%) was observed under mustard crop and the least improvement was noticed under pumpkin crop (64.1%). In general, organic farming results 39-127% improvement in dehydrogenase activity over the absolute control soil under the similar crop growing condition. On the other hand chemical farming yields 2-23% less dehydrogenase activity when compared with no input soil. The results clearly indicate the adverse effect of chemical farming under different crops. The plant contribution and soil contribution to dehydrogenase activity was also partitioned. It was found that there was great variation among the crops. The soil contribution was found to be much higher, in general, than plant contribution. The overall results showed 64.2% activities of dehydrogenase contributed by soil and 35.8% were contributing by plants. On an average, 18% decline in dehydrogenase activity was observed when chemical farming was practiced as compared to no input (no chemical, no organic), which also clearly indicated that chemical farming has an adverse effect on soil dehydrogenase activity. The results also showed that organic farming promotes dehydrogenase activity, in general, by 43% as compared to the crops growing under no input land. The most negative effect toward dehydrogenase activity under chemical farming was noticed on pumpkin crop followed by chickpea and mustard crop (Figure 1).
Crops |
Control * |
No input |
Chemical farming |
Organic farming |
Wheat |
0.79 |
1.55 |
1.52 |
2.35 |
Potato |
0.8 |
1.48 |
1.43 |
1.79 |
Garlic |
0.8 |
1.16 |
1.05 |
1.49 |
Mustard |
0.79 |
1.39 |
1.13 |
3.16 |
Chick pea |
0.79 |
1 |
0.8 |
1.45 |
Chilli |
0.8 |
1.47 |
1.31 |
2.34 |
Pumpkin |
0.78 |
0.92 |
0.71 |
1.28 |
LSD(p=0.05) |
0.15 |
0.23 |
0.31 |
0.38 |
Table 1 Dehydrogenase activity (pkat/g) under different crops and farming practice
*barren land, no crops
The activity of fungi, bacteria and actinomycetes in the soil (Esterase activity) under study resulted; 2-8.7 fold improvement in esterase activity under different crop rhizosphere (Table 2). Organic farming practice has more esterase activity under wheat followed by mustard. Although there were little differences in esterase activity under control soil of different crops but the results showed consistently higher in esterase activity (28-56%) under organic farming soils over chemical farming. Chemical farming also resulted up to 12% decline in esterase activity as compared to absolute control i.e. no input land (Figure 2). A comparison of plant and soil contribution towards esterase activity was made and it was found that 60.4% esterase activity was contributed by plants whereas soil contribution was only 39.6%. In general, more plant contribution was noticed under garlic and least under pumpkin whereas more soil contribution was observed under chilli (Figure 2). Acid phosphatase mainly contributed by the plants and microorganisms in soil. Phosphatase enzymes helps in hydrolysis of C-O-P ester bond of organic phosphorus in plant available inorganic P in phosphate form. The activity of acid phosphatase under different input as well as seven crops was presented in Table 3. In general, there were no differences in acid phosphatase activity under no crop condition of different crops land. However the results showed more influence of acid phosphatase in organic farming where 3-6 fold improvement in activities was noticed as compared to absolute control. The maximum improvement was obtained in wheat followed by chick pea. In general, 38.7% more acid phosphatase activity was found in organic farming than chemical farming (Figure 3), where at least in two different crops (mustard and chilli) the activities under chemical farming decline than no input land. Except mustard, garlic and chilli all other crops had higher acid phosphatase activity under chemical farming as compared to no input crops.
Crops |
Control * |
No input |
Chemical farming |
Organic farming |
Wheat |
2.4 |
6.7 |
6.4 |
23.3 |
Potato |
2.6 |
7.3 |
7.2 |
17.9 |
Garlic |
2.8 |
9.7 |
9.4 |
22.6 |
Mustard |
4.1 |
12.8 |
12.4 |
36.9 |
Chick pea |
3.8 |
10.3 |
9.4 |
14.1 |
Chilli |
4.2 |
7.8 |
6.9 |
20.7 |
Pumpkin |
3.2 |
5.9 |
5.8 |
12.7 |
LSD(p=0.05) |
0.9 |
1.3 |
1.9 |
2.1 |
Table 2 Esterase activity (EU x 10-3) under different crops and farming practice
*barren land, no crops
Crops |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
0.6 |
1.8 |
4 |
4.2 |
Potato |
0.8 |
2.8 |
3.2 |
3.9 |
Garlic |
0.9 |
3.4 |
3.4 |
4 |
Mustard |
0.8 |
2.6 |
2.5 |
4.3 |
Chick pea |
0.7 |
2.5 |
3.2 |
4.3 |
Chilli |
0.8 |
2.9 |
2.8 |
4.4 |
Pumpkin |
0.8 |
2.7 |
3.3 |
4.2 |
LSD(p=0.05) |
0.3 |
0.7 |
0.9 |
0.8 |
Table 3 Acid phosphatase (EUx10-3) under different crops and farming practice
*barren land, no crops
Alkaline phosphatase is only contributing by microorganisms present in the soil. They are also equally effective in breaking down the C-O-P ester bond to bring phosphorus into phosphate form for plant availability. In general, organic farming results 25-100% improvement in alkaline phosphatase activity (Table 4) as compared to soil of absolute control. Potato crop growing areas showed more improvement in alkaline phosphatase activity followed by garlic. The results clearly showed that there were hardly any differences in alkaline phosphatase activity under no crop (control) land but up to18% decline in alkaline phosphatase activity over no input land when crops were growing under chemical farming. However, 10-40% improvement in alkaline phosphatase activity was noticed when farmers are practicing organic farming (Figure 4). The result indicated tremendous contribution of organic farming on alkaline phosphatase activity. In general, between the farming systems, the alkaline phosphatase activity under chemical farming was 73.4% less than organic farming irrespective of the crops cultivated. Except mustard, all other crops showed negative impact of alkaline phosphatase activities under chemical farming (Figure 4). The decline in alkaline phosphatase activity under potato was more (18.2%) followed by garlic (16.7%) and pumpkin (15.4%), which indicate an adverse effect on soil health due to chemical farming practice.
Crops |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
0.6 |
1 |
0.9 |
1.1 |
Potato |
0.7 |
1.1 |
0.9 |
1.4 |
Garlic |
0.8 |
1.2 |
1 |
1.5 |
Mustard |
1 |
1 |
1 |
1.4 |
Chick pea |
0.9 |
0.9 |
0.8 |
1.2 |
Chilli |
0.8 |
1 |
0.9 |
1.4 |
Pumpkin |
0.9 |
1.3 |
1.1 |
1.5 |
LSD9p=0.05) |
0.3 |
0.4 |
0.4 |
0.7 |
Table 4 Alkaline phosphatase (EUx10-3) under different crops and farming practice
*barren land, no crops
Microbial population
The fungi population on different crops was increased over control soil between 6 and 36 fold (Table 5) when organic farming was practiced. The population was much less under chemical farming (Figure 5). Except mustard, all other crops showed decline in fungal population under chemical farming than no input cultivation. The mustard field showed there was 59.7% improvement in the population under chemical farming than no input land which was further enhanced to 14-47% under organic farming. The more increase in fungal population was observed when mustard was grown in organic farming followed by potato. In general, 90% reduction in fungal population was observed under chemical farming as compared to organic farming growing plants although hardly any difference in population was observed under control soil (Table 5). The most affected crops due to chemical farming seems to be potato and chick pea. It was noticed that plant contribution for fungal population development was much higher than soil contribution. The reduction in population due to chemical farming varies between 2.5-49.7% under different crops than no input agriculture. However, up to 16 fold improvement in fungal population was noticed due to organic farming practice when compared with no input crops (Figure 5). Organic farming enhances bacteria population between 1.8- 6.2 fold under different crops (Table 6), which was 78% more build up than chemical farming. The higher build up was noticed under pumpkin followed by chilli and wheat. The plant contribution towards bacteria population was noticed between 42 and 66%. The reduction on population due to chemical farming over no input crop was between 5 and 33%, which was more under mustard followed by garlic. In general, 50-241% increase in bacteria population was observed under organic farming over no input land. The adverse effect of chemical farming in bacterial population was obvious and it was more alarming especially under mustard, chick pea and garlic (Figure 6). The population build up under organic farming was found to be very effective under wheat followed by pumpkin among the seven crops compared. Organic farming build up 47-483% more actinomycetes population under seven crops tested (Table 7). The results showed more plant contribution under mustard (52.9%) to build up actinomycetes population.
Crops |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
5.5 |
22 |
20 |
66.5 |
Potato |
3.5 |
7 |
6 |
120 |
Garlic |
7 |
20 |
19.5 |
94 |
Mustard |
3 |
7.2 |
11.5 |
111 |
Chick pea |
6.5 |
18.7 |
8 |
180 |
Chilli |
8.5 |
20 |
14 |
160 |
Pumpkin |
7 |
14.1 |
12 |
52 |
LSDp(=0.05) |
4.2 |
7.3 |
6.5 |
11.1 |
Table 5 Fungi (CFUx103/g) population under different crops and farming practice
*barren land, no crops
Crops |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
2.5 |
4.4 |
4 |
15 |
Potato |
3 |
8.4 |
8 |
12 |
Garlic |
4.5 |
10.4 |
7 |
26 |
Mustard |
3.5 |
6 |
4 |
10 |
Chick pea |
5 |
9.3 |
7 |
14 |
Chilli |
2 |
5.8 |
5.5 |
12.5 |
Pumpkin |
4 |
8.8 |
8 |
29 |
LSD(p=0.05) |
1.7 |
1.9 |
1.8 |
3.5 |
Table 6 Bacteria (CFUx105/g) population under different crops and farming practice
*barren land, no crops
Crops |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
34 |
43 |
39 |
50 |
Potato |
39 |
45 |
40 |
67 |
Garlic |
22 |
24 |
21 |
56 |
Mustard |
17 |
26 |
24 |
85 |
Chick pea |
18 |
23 |
22 |
105 |
Chilli |
20 |
24 |
24 |
45 |
Pumpkin |
25 |
30 |
28 |
70 |
LSD (p=0.05) |
7.1 |
11.2 |
8.7 |
13.5 |
Table 7 Actinomycetes (CFUx104/g) population under different crops and farming practice
*barren land, no crops
However, garlic showed (9.1%) least plant contribution towards build up of the organisms. The reduction in activity due to chemical farming was between 0-13%, which was more under garlic and least under chilli. The results showed 93% more build up of actinomycetes population under organic farming as compared to chemical farming (Figure 7). The maximum response to organic farming was observed under chick pea (356.5%) followed by mustard (226.9%). The least effect due to organic farming was observed under wheat (16.3%). It was very clear from the results that organic farming has definite edge over chemical farming and no input land to build up different organism’s population under the rhizosphere of different crops grown in this region. Azotobacter is a free living nitrogen fixer, can fix nitrogen from the atmosphere without any outside help. In our study, their population was tremendously improved (up to 10 fold) due to organic farming practice under different crops (Table 8). It was more under mustard followed by potato and pumpkin. Although there was no significant difference in azotobacter population to the barren land soil used for cultivation of seven crops tested.
Crop |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
0.5 |
1.4 |
1.5 |
3 |
Potato |
0.4 |
1 |
1 |
4 |
Garlic |
0.5 |
0.9 |
0.6 |
1 |
Mustard |
0.5 |
0.5 |
0.1 |
5.5 |
Chick pea |
0.3 |
0.4 |
0.1 |
2 |
Chilli |
0.4 |
0.6 |
0.5 |
3 |
Pumpkin |
0.5 |
0.8 |
0.7 |
5 |
LSD(p=0.05) |
0.3 |
0.4 |
0.5 |
0.8 |
Table 8 Azotobacter (CFU×102/g) population under different crops and farming practice
*Barren land, no crops
In most of the crops showed an adverse effect on Azotobacter population when chemical farming was practiced as compared to no input condition. The result suggested that organic farming may booster nitrogen fixer population in the soil where in almost all the crops showed 1-10 fold increase in population accept garlic where organic farming resulted only 11.1% improvement in Azotobacter population (Figure 8). Except under mustard all other crop shows significant plant contribution (25-64.3%) to build up Azotobacter population in the soil. The highest contribution was found under wheat followed by potato. Nitrosomonas helps in transformation of nitrogen in plant available form, which was much higher (between 75 and 354%) under organic farming as compared to the chemical farming (between -24 and 102%). Organic farming under potato resulted more build up of population followed by wheat and pumpkin (Table 9). The results showed up to 54% influence on build up in nitrosomonas population under potato followed by garlic (33%) whereas wheat crop showed least influence on build up of nitrosomonas population. There was 36% reduction in nitrosomonas population under wheat when chemical farming was practiced. The least reduction (-1.5%) was observed under potato followed by pumpkin (-9.4%). Organic farming enhance nitrosomonas population between 36 and 160% than no input land (Figure 9) which was more under wheat and least under chick pea. The results suggested in enhancing nitrifying bacterial population, organic farming has a great role.
Crops |
Control* |
No input |
Chemical farming |
Organic farming |
Wheat |
29 |
30 |
22 |
78 |
Potato |
31 |
67 |
66 |
141 |
Garlic |
28 |
42 |
35 |
60 |
Mustard |
29 |
39 |
35 |
57 |
Chick pea |
30 |
39 |
33 |
53 |
Chilli |
28 |
35 |
24 |
49 |
Pumpkin |
30 |
35 |
32 |
75 |
LSD (p=0.05) |
5.1 |
7.3 |
6.9 |
13 |
Table 9 Nitrosomonas(CFU g-1) population under different crops and farming practice
*barren land, no crops
We found that significant improvement in microbial population and enzyme activities in the soil under different crops due to organic farming practice than chemical and no input farming. For organic farming systems, nutrient cycling and relative ability of the soil for nutrients can be high.21 Compost contains bacterial, actinomycetes, and fungi; hence a fresh supply of humic material not only added microorganisms but also stimulated them.22,23 Composting material added plenty of carbon and thus increased heterotrophic bacteria and fungi in soil and farther increased the activity of soil enzymes responsible for the conversion of available form of nutrient.24 The higher soil microbial activity due to organic farming may be higher soil respiration due to the stimulation of heterotrophic microorganisms.25 Other comparisons of the conventional and organic farming systems have also reported an increase in the soil microbial respiration under organic management.26,27 In our result organic farming has higher bacterial, fungal, actinomycetes, Azotobacter and Nitrosomonas population compared to chemical and no-input farming systems. The applications of animals’ manures and compost increase in activity and diversity of the microbial community28 such enhancement to the soil microbial community might have benefits for plants productivity through increased nutrient cycling rate.29
Besides compost played an important role in control of plant nematodes and in mitigating the effect of pesticides and limits degradation as well as transport in soil, Farm Yard Manure or vermicompost added plenty of carbon and thus increased heterotrophic bacteria and fungi in soil and further increased the activity of soil enzymes responsible for the conversion of unavailable to available form of nutrients. Densities of bacteria, protozoa, nematodes, and arthopodes in soils under organic farming were higher than conventional farming.24,30 Organic agriculture also reduces the risk of yield failure, stabilizes returns and quality of soil health.31 This study shows further evidence as to organic farming is improving the soil health and quality without affecting the environment.
None.
Authors declare that there is no conflict of interest.
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