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eISSN: 2373-437X

Microbiology & Experimentation

Research Article Volume 5 Issue 5

Prospection of Hepatitis E Virus in Human, Swine and Sewage Samples in Spain

Fogeda M,1 Avellon A,1 Cabrerizo M,1 Trallero G,1 Garcia L,2 Martin M,3 Sampedro A,4 Sanchez R,5 Schuller de Santos C,2 Serrano E,6 Cilla CG,6 Garcia Arevalo C,6 Tajada P,7 Echevarria JM1

1Department of Virology, Nacional Centre for Microbiology Instituto de Salud Carlos III, Spain
2Department of Virology, Nacional Centre for Microbiology Consorcio Agropecuario, Spain
3Department of Anatomia Animals, Campus Bellaterra, Spain
4Department of Anatomia Animals, Hospital Virgen de las Nieves, Spain
5Department of Anatomia Animals, Hospital Comarcal de Llerena, Spain
6Department of Anatomia Animals, Hospital de Donostia, Spain
7Department of Anatomia Animals, Hospital General de Segovia, Spain

Correspondence: Marta Fogeda M, Service of Diagnostic Microbiology, National Centre for Microbiology, Crta Majadahonda Pozuelo, 28220 Majadahonda, Madrid, Spain & WERFEN, Private Company, Tel 636406513, Fax 34 91 7639901

Received: July 11, 2017 | Published: August 18, 2017

Citation: : Fogeda M, Avellón A, Cabrerizo M, Trallero G, García L et al. (2017) Prospection of Hepatitis E Virus in Human, Swine and Sewage Samples in Spain. J Microbiol Exp 5(5): 00159. DOI: 10.15406/jmen.2017.05.00159

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Abstract

Hepatitis E virus (HEV) has been detected in Spain among patients with acute hepatitis, swine livestock, wild fauna and urban sewage, but prospective studies have been scarce. The incidence of the infection among humans and the mechanisms for acquisition of local HEV strains are unknown. Serum samples from 46 prospectively selected patients displaying liver alterations were tested for IgG and IgM antibody to HEV (anti-HEV) and for HEV RNA. HEV RNA was investigated in 287 stool samples from piglets and in 45 sewage samples from a single region, and anti-HEV was tested in 94 serum samples from piglets from the same farms. Acute HEV infection was identified in six patients (13.4%), and evidence of contact with HEV in the past, but unrelated to the ongoing liver alterations, was obtained in eight (17.3%). Two imported and four autochthonous cases of acute infection were recorded. Most autochthonous cases were found in the Basque Country, where swine livestock is not of economic importance. HEV RNA was detected in stool samples from three piglets aged 6-8 weeks from a single farm (1%), and anti-HEV was found among piglets from all farms at rates ranging overall from 18.1 to 58.3%, but from 70.8 to 71.4% among the oldest ones (22-23 weeks old). All sewage samples tested negative for HEV RNA. The results show that locally acquired, human HEV infection might be significantly more frequent in the Northern regions of Spain, and that swine livestock might not be in the origin of most of these infections.

Keywords: HEV RNA,anti-HEV, swine livestock, urban sewage

Abbreviations

HEV, hepatitis E Virus; EILSA, enzyme-linked immunosorbent assay

Introduction

Hepatitis E virus (HEV) infection among humans is sporadic in European countries. Nevertheless, cases of HEV infection, either imported or autochthonous, have been reported from many countries, including Spain.1,2 With a single exception,3 autochthonous cases reported from Europe were always due to HEV genotype 3 (HEV-3), which has been found also in swine livestock, wild boar and deer, and might be circulating among other animals. HEV genotype 1 (HEV-1) has been, however, repeatedly detected in sewage from the city of Barcelona.4 Direct contact with infected animals and consumption of contaminated meat are involved in transmission of HEV-3 to humans,5-7 but other mechanisms cannot be ruled-out. HEV-3 strains isolated from humans and swine livestock from the same country have always been found closely related.8,9

The prevalence of antibody to HEV (anti-HEV) among pigs seems quite variable in Europe, the figures ranging from 22% to 55%.7,10–12 Spain is the second country of the European Union in regard to porcine production, and the prevalence of anti-HEV can be as high as 97% among pigs older than six months.10,13 Although this infection is often qualified as emerging in Europe, HEV has been present in Spanish pig farms at least since 1985.14

Acute HEV infection may be entirely asymptomatic or may present as a self-limited febrile illness with abnormalities in liver function. Mortality is low unless among pregnant women. Chronic hepatitis associated to viral persistence has, however, been reported among transplant recipients who became infected shortly after transplant.15,18 In Spain, HEV was found involved in 11% of cases from a series of acute hepatitis of unknown origin reported recently, and in 8% of those unrelated to international travel or immigration.2 In addition, the overall prevalence of anti-HEV found in samples representative of the Spanish general population ranged from 1 to 7% in studies performed in Madrid19 and Catalonia,20 respectively.

Investigation of the HEV infection has been performed mainly among patients with acute hepatitis, and this strategy cannot detect asymptomatic infections. In addition, prospective investigation of HEV among patients and swine livestock from a given geographical area has been performed just once in Spain.21 In the present study, HEV was prospectively investigated in patients from four regions of the country who displayed either acute hepatitis or abnormal aminotransferase serum levels in absence of symptoms, and also in swine livestock and in sewage samples from one of these regions.

Material and methods

Patients and clinical samples

Prospection of human HEV infections was performed on patients admitted from January 2009 to December 2010 in four hospitals emplaced in the North (Donostia, Basque Country), the West (Llerena, Extremadura), the Centre (Segovia, Castile-León) and the South (Granada, Andalousia) of Spain. One thousand an ninety three patients displaying abnormal serum aminotransferase levels (ALT and/or AST≥200) in absence of specific markers of acute infection by hepatitis A, B and C viruses and lacking any other explanation for biochemical alterations, were selected at two local hospitals (Segovia and Llerena). In addition, 762 patients presenting with symptoms of acute hepatitis (fever, jaundice and ALT/AST≥200) of unknown origin were selected at two reference hospitals (Donostia and Granada). A single serum sample (0.3 ml) was collected from all patients, and demographic, clinical and epidemiological data were recorded according to a common protocol formerly agreed by participants. Data collection included antecedents of recent travel to HEV endemic areas, frequent contact with pigs or other livestock, professional farming activity, and habits of consumption of undercooked pork meat.

Testing of human and animal samples was done after obtaining institutional approval for ethical issues.

Definitions for HEV infection and disease

Diagnosis of HEV infection and disease was based on the following definitions:

Lack of prior contact with HEV: Absence of anti-HEV IgG, IgM and viral RNA. Past infection: Presence of anti-HEV IgG in absence of anti-HEV IgM and HEV RNA. Acute infection (window period): Detection of viral RNA in absence of anti-HEV IgM and IgG. Acute infection (early seroconversion phase): Detection of anti-HEV IgM and viral RNA in absence of anti-HEV IgG. Acute infection (early post-seroconversion phase): Detection of anti-HEV IgM and IgG and viral RNA. Acute infection: (late post-seroconversion phase): Detection of anti-HEV IgM and IgG in absence of viral RNA. Any other pattern of specific markers of HEV infection was interpreted as reflecting non-specific reactivity or sample contamination. Hepatitis E: Abnormal ALT/AST serum level associated to acute HEV infection. Acute hepatitis E. Acute hepatitis associated to acute HEV infection.

Samples from swine livestock

Anti-HEV IgG and HEV RNA were investigated in serum or stool samples, respectively, from pigs grown in four farms from two localities (Cantalejo and Coca) of the province of Segovia. Two-hundred and eighty-seven stool samples and 94 serum samples were obtained from individuals aged 6 to 23 weeks, from March 2009 to February 2010 (Table 1). The number of animals sampled at each farm was in proportion to the size of the herds. Individually wrapped, sterile disposable material was used for collecting the stool specimens. Samples were stored at -80°C until testing.

Region

Patients included    

Patients selected for HEV testing   

Anti-HEV

HEV
RNA

Total (EIA)  

IgG (RIBT)   

IgM (RIBT)  

Castile-León

930

2

0

0

0

0

Extremadura

163

11

7

7

1

0

Andalousia

652

14

0

0

0

0

Basque Country

110

19

13

7

5

2

Total

1855

46

20

14

6

2

Table 1 Results obtained from anti-HEV and HEV RNA testing in 46 selected patients displaying alteration of the liver function (ALT).

Sewage samples

Forty-five sewage samples were collected at the entry of four plants for sewage treatment emplaced at the localities of Cantalejo, Coca, Palazuelos de Eresma, and Villacastín, in the province of Segovia. Sampling extended from February 2009 to December 2010. Samples were collected in sterile 500-mL polyethylene containers and kept at 4ºC for less than eight hours before viral particles were concentrated in phosphate buffered saline solution (PBS, pH 7.3)22 and stored at -80°C.

Laboratory tests

Total anti-HEV was tested in human serum samples by indirect enzyme-immunoassay (EIA) (HEV Ab, Diagnostic Bioprobes Srl, Milano Italy). Performance parameters of this test were described previously.19 Samples reactive for total anti-HEV were tested separately for anti-HEV IgG and IgM by recombinant immunoblot test RIBT (recombLine HEV, Mikrogen GmbH, Martinsried, Germany). Test validation and interpretation of results were done as specified by the manufacturer.

Serum samples from 94 pigs were tested for specific anti-HEV IgG antibodies using an in house enzyme-linked immunosorbent assay (ELISA) as described elsewhere.23 To minimize the background colour a corrected optical density (OD) was calculated (antigen-coated well OD value less uncoated well OD value). The working solution for anti-IgG conjugate was 1:50,000 (Serotec ltd., Oxford, UK). The optical density was read at 450 nm. Control sera included in each plate were obtained from pigs identified as positive or negative as previously described.24 Samples that had an OD value equal or greater than the cut-off value (0.300) were considered positive.24

HEV RNA was tested in human, swine and sewage samples by reverse-transcription, nested polymerase chain reaction (RT-PCR).1 RNA extraction was performed by an automated method (MagNa Pure LC, Roche, Mannheim, Germany). HEV genome fragments from ORF1 and ORF2 amplified by RT-PCR were submitted to direct sequencing, and sequences were compared by phylogenetic analysis.1

Results

HEV infection among humans

Abnormal serum aminotransferase level (ALT and/or AST≥ 200 UI/l) was found in samples from 1855 patients (Table 1). Seven hundred and sixty-two patients had symptoms of acute hepatitis at admission. After testing for markers of infection by hepatitis A, B and C viruses, and investigating potential causes of non-infectious nature, 46 patients (2.5%) were selected for HEV testing. Reactivity for anti-HEV was found by EIA in samples from 20 patients, and was confirmed by RIBT in 14 (Table 2). Six of these 14 patients tested positive for anti-HEV IgM. HEV RNA was found by PCR in two of them, and both HEV strains were from genotype 3. One of these two patients tested negative for anti-HEV by RIBT, and seroconversion to anti-HEV IgM and IgG was found on follow-up. Accordingly with the criteria for interpretation of results explained above, acute HEV infection was, therefore, identified in six of the 46 suspected cases (13.4%), and evidence of contact with HEV in the past, but unrelated to the ongoing liver alterations, was obtained in eight (17.3%).

Patient

Region

Date of sampling

Anti-HEV
IgG/IgM (RIBT)

HEV RNA (PCR)
ORF1/ORF2

Travel

1

Basque Country

Apr-20-2009

+/+

-/-

Yes

2

Basque Country

Jun-12-2009

+/+

-/-

No

3a

Basque Country

Oct-26-2009
Nov-06-2009

-/-
+/+

+/+
-/-

No

4

Basque Country

Dec-29-2009

+/+

-/-

Yes

5

Extremadura

Jul-26-2010

+/+

-/-

No

6

Basque Country

Sept-04-2009

+/-

-/-

No

7

Basque Country

Jun-28-2010

+/-

-/-

No

8

Extremadura

Jul-26-2010

+/-

-/-

No

9

Extremadura

Jul-26-2010

+/-

-/-

No

10

Extremadura

Jul-26-2010

+/-

-/-

No

11

Extremadura

Jul-26-2010

+/-

-/-

No

12

Basque Country

Apr-27-2011

+/+

+/+

No

13

Extremadura

Sep-20-2011

+/-

-/-

No

14

Extremadura

Sep-30-2011

+/-

-/-

No

Table 2 HEV infection markers identified in samples from 14 patients displaying anti-HEV in serum.
a-Sample from October 26 was tested for HEV RNA after the next one tested positive for anti-HEV.

Five of six patients with acute HEV infection were residents of the Basque Country, and two of them referred a recent international travel. The remaining was from Extremadura and did not travel abroad. Two imported and four autochthonous cases of acute HEV infection were, therefore, found. None of the last four patients had professional contact with pigs, nor recognised a habit of consumption of raw pork meat.

Prospection of HEV infection in swine livestock

HEV RNA was detected in three of 287 swine stool samples tested (1%) (Table 3). Positive samples were taken from piglets six to eight weeks old from a single farm (Cantalejo). HEV-3 was identified by sequencing in one sample.

Farm

Age (Weeks)

HEV RNA in stool

Anti-HEV IgG in serum

Tested

Positive (%)

Tested

Positive (%)

Cantalejo

6-8

26

3 (11.5)

-

-

11-14

54

0

24

14 (58.3)

Coca-1

11-14

31

0

11

5 (45.4)

22-23

14

0

14

10 (71.4)

Coca-2

11-14

103

0

21

6 (28.5)

22-23

24

0

24

17 (70.8)

Coca 3

11-14

35

0

-

-

Total

6-8

26

3 (11.5)

-

-

11-14

223

0

56

25 (44.6)

22-23

38

0

38

27 (71.1)

Table 3 Results for HEV RNA and anti-HEV obtained in samples from swine livestock from the province of Segovia.

Anti-HEV was found in 52 of 94 (55.3%) swine serum samples tested. Positive samples were found in piglets from all farms, the prevalence ranging from 51.1 to 60%. Piglets aged above 20 weeks displayed the highest anti-HEV prevalence (71.1%).

Testing of HEV RNA in sewage

Forty-five sewage samples were collected and tested for HEV RNA. All samples tested negative. Amplification of the internal control was observed in all cases.

Discussion

Prospective studies in regard to HEV infection among humans have been scarce in Spain.21 The present study was designed for approaching the role of HEV as an agent causing liver alterations in our country, either asymptomatic or resulting in acute hepatitis. Since viral RNA was investigated only in samples testing positive for anti-HEV, patients sampled during the window period of the infection would not have been recognised. Keeping in mind such limitations, acute HEV infection was diagnosed in six of 46 (13.0%) patients displaying liver alterations of unknown etiology studied. Such yield was very close to the yield reported previously from a retrospective study where HEV was found responsible for 11.4% of 277 suspected cases studied.2

In addition to patients displaying markers specific for acute HEV infection, anti-HEV IgG was found in eight patients (17.4%) testing negative for anti-HEV IgM and HEV RNA, who were interpreted as having had a prior contact with HEV unrelated with their current liver abnormalities. The prevalence of anti-HEV among adults from the Spanish general population was, in contrast, estimated 7.3% in Catalonia20 and 2.2% in Madrid,19 which represents from less than one half to one eighth the prevalence found among the patients selected in the present study. Six of these eight patients were studied because detection of abnormal aminotransferase serum level of unexplained origin in absence of symptoms of acute hepatitis. The current concepts about the natural history of the acute HEV infection have been established after the study of patients with acute hepatitis due to HEV-1 strains. Whether the asymptomatic acute infection caused by HEV-3 strains might or not originate a different viral dynamics and a different pattern of antibody response remains, therefore, open to discussion.

The selection of centres participating in the present study was done with the aim of testing the hypothesis of swine livestock as a main reservoir for transmission of HEV to humans. The hospital of Llerena represented a region of Spain (Extremadura) where swine livestock accounts among the main economic activities. Eleven patients were selected to study at that centre, and just one (9%) could be diagnosed of acute HEV infection. In contrast, the hospital of Donostia represented a region (Basque Country) where swine livestock is scarce and is irrelevant for economy. This centre selected 19 patients to study, and three (15.8%) were identified as suffering an acute HEV infection acquired locally. Clustering of cases of acute HEV infection in the North of Spain was already reported.2 and has been confirmed by additional data.25 The results of the present investigation do not support, therefore, swine livestock as a main source for human HEV infections in Spain.

An aim of the present study was investigating human and swine HEV infection, and presence of HEV in sewage, within the limits of a rural area where swine livestock is common. After considering 930 patients with abnormal aminotransferase serum levels, just two cases could be selected for study by the regional hospital of Segovia, and both tested negative for HEV markers. In agreement with these findings, HEV RNA was not found in sewage after testing a significant number of samples, which contrasts strongly with the findings reported from certain urban areas of Spain.22,26 Although sewage is treated before being released to the environment, conventional wastewater treatment does not completely remove all viruses.27 This would explain why in some studies HEV is detected in sewage.

Results from testing anti-HEV in swine livestock showed, in contrast, that virus infection of piglets less than 22 weeks of age is a common event in the farms of the region, and the finding of HEV RNA in stool from just two of 26 piglets aged from six to eight weeks suggested that the infection takes place very early in life. Other studies performed in Spain.14,28,29 and elsewhere30,31 have drawn similar conclusions.

Conclusion

The present study suggests, in conclusion, that although the HEV infection is common among the Spanish swine livestock, pigs might not be in the origin of most autochthonous human infections in Spain. Food prepared with cured pork meat is traditionally consumed by Spaniards, but consumption of raw pork meat or pork liver is exceptional in Spain. However, acquisition of HEV by consumption of cured pork meat products has been recently reported.32 In addition to pigs, anti-HEV has been detected among bovine livestock from several countries, including Spain,23 and HEV RNA from genotype 4 has been reported from stool samples from cattle in the Chinese region of Xinjian.33 Cattle feeding are a main activity in rural areas from the Northern regions of Spain, where human HEV infections seem to cluster. Development of prospective studies involving patients with liver abnormalities and livestock other than swine from these regions is likely to provide significant data about the epidemiology of the HEV infection in Spain, as well as to focus future studies in regard to HEV transmission in Europe.

Acknowledgments

The authors wish to thank Isidoro Bustillo, Carmen García and Lucía Morago for their excellent technical assistance, as well as Dr Rosina Gironés for providing support to concentrate HEV from water. This work was supported by grant PI/080865 from the Fondo de Investigaciones Sanitarias, Spanish Ministry of Science and Innovation.

Conflicts of interest

The authors declare no conflicts of interest.

Funding

None.                      

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